Default xpose boxplot function — xplot

Manually generate boxplots from an xpdb object.

Usage

xplot_boxplot(
  xpdb,
  mapping = NULL,
  type = "bo",
  xscale = "discrete",
  yscale = "continuous",
  orientation = "x",
  group = "ID",
  title = NULL,
  subtitle = NULL,
  caption = NULL,
  tag = NULL,
  plot_name = "boxplot",
  gg_theme,
  xp_theme,
  opt,
  quiet,
  jitter_seed,
  ...
)

Arguments

xpdb: <xp_xtras> or <xpose_data> object
mapping: ggplot2 style mapping
type: See Details.
xscale: Defaults to discrete.
yscale: Defaults to continuous, used as check if orientation changed.
orientation: Defaults to x
group: Grouping for connecting lines through jitter
title: Plot title
subtitle: Plot subtitle
caption: Plot caption
tag: Plot tag
plot_name: Metadata name of plot
gg_theme: As in xpose
xp_theme: As in xpose
opt: Processing options for fetched data
quiet: Silence extra debugging output
jitter_seed: A numeric, optional seed to be used in jitters
...: Any additional aesthetics.

Value

The desired plot

Details

For type-based customization of plots:

b box-whisker (using default quantiles)
p points (from geom_dotplot)
v violin (from geom_violin)
o outliers (show outliers)
l line through 0 (or as indicated in hline_yintercept or yline_xintercept)
s smooth line (from geom_smooth)
j jitter points (from geom_jitter)
c connecting lines for jitter points (from geom_path)